Leonel Malacrida
@malacridalab.bsky.social
340 followers 470 following 46 posts
Head of the Advanced Bioimaging Unit, joint center Udelar & Inst. Pasteur Montevideo. Imaging Scientist CZI and LABI executive committee.
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Extremely excited to share quite an achievement for our group. Two years ago, we started #PhasorPy (www.phasorpy.org, now in our v0.8). In parallel, Bruno Pannunzio, in collaboration with Marcelo Zoccoller, led the hashtag#Napari_Phasors plugin v0.1 for FLIM & HSI phasor analysis.
I'm thrilled to share this with the community.
Take a look, feedback is always very much welcome!
Congrats Bruno Pannunzio Marcelo Leomil Zoccoler !
-FLIM calibration, multi-harmonic analysis, filtering/thresholding, Cursors selection, average lifetimes (tau mod, tau phase, tau normal), two components (multi-components coming soon), and FRET module.
-HSI analysis using the same tools, just under a bottom push.
- Sample data for FLIM and HSI.
Extremely excited to share quite an achievement for our group. Two years ago, we started #PhasorPy (www.phasorpy.org, now in our v0.8). In parallel, Bruno Pannunzio, in collaboration with Marcelo Zoccoller, led the hashtag#Napari_Phasors plugin v0.1 for FLIM & HSI phasor analysis.
Thanks to @ipmontevideo.bsky.social #Udelar #HospitaldeClinicas #FMed all my collaborators from #AdvancedBioimagingUnit and across the world and @chanzuckerberg.bsky.social for all the support over the years!
Extremely honored to be included in 2026 #ThePhotonics100 #Electrooptics for “the innovators, the boundary-pushers, the disruptors, the out-of-the-box thinkers and the R&D ‘rock stars’” driving the industry forward.
Happy to represent Uruguay & Latin America
www.electrooptics.com/article/leon...
Big part of #LABI, Latin America grantees and friends reunited at #ImagingTheFuture 2025 @cziscience.bsky.social
Thanks!
Thanks @cziscience.bsky.social
#ImagingTheFuture for reuniting @LatamBioimaging another year. The #UBA participated with a poster Marcela Diaz and a Demo #phasorpy showing all our work in the past years. Intense and stimulating discuss drives us to next steps in shaping the future
#ImagingTheFuture2025 @chanzuckerberg.bsky.social Another year traveling with the one and only “Oliver” Andres Olivera #LABI. Looking forward to stimulating discussions and contributing to shaping “Biology in Action.”
New preprint by @UBA Micaela LopassioMicaela MJGarcia
Quantitative and unbiased lung alveolar septum assessment in a LPS experimental mouse model using 2D-spatial correlation image analysis from hematoxylin and eosin slides. biorxiv.org/content/10.110…
🫁🔬💻🟰results
Just a moment...
Verifying you are human. This may take a few seconds.
https://biorxiv.org/content/10.110…
We have a small fellowship bursary, but we strongly support participants from Latin America and around the world to apply for fellowships:
#LABI
labi.lat/2025/06/04/l... Deadline July 7, 2025
#GBI #I4A globalbioimaging.org/i4a Deadline August 15, 2025.
LABI Fellowships: Second call 2025
labi.lat
I am happy to announce the open call for our "6th Workshop in Advanced Microscopy and Biophotonics"
It will be held from November 22nd to 28th in Montevideo, Uruguay. It will cover advanced technologies and techniques as usual #FLIM #HSI #Phasors #FCS #SR #SPIM #2P
pasteur.uy/cursos-y-cha...
6th Workshop in Advanced Microscopy and Biophotonics - Institut Pasteur
pasteur.uy
The Latin American crew (25 👩‍🔬👨‍🔬👩‍💻👨‍💻) gathered at the #webersymposium2025. Multiple generations celebrated our proud roots 🇧🇷🇦🇷🇨🇱🇺🇾🇨🇺🇧🇴. Thanks @chanzuckerberg.bsky.social, for enabling 13 travel fellowships to attend this great meeting at the beautiful Genoa 🇮🇹
Part of the team #UBA #LeconteLudovic #Marceladiaz and good friend #RamiroTomasina ready to go to #WeberSymposium2025 #Genova 🇮🇹
#Garcia__Majo already in Genoa
I am excited to be accompanied by a great team this time! 🇺🇾
Reposted by Leonel Malacrida
🌍 The 2nd #Imaging4All call is OPEN 🎉
Researchers in LMICs can apply for fully funded visits to access imaging technologies & training worldwide.

🔗 Info: www.globalbioimaging.org/i4a
🧪 Questions? [email protected]
🔬 Imaging facilities—please share & host a grantee!
Reposted by Leonel Malacrida
📣Abstract submission and registration still open for the 2025 Weber Symposium!
Follow the link: www.webersymposium.com
If you are MSc/PhD/PostDoc based in Latin America, you are eligible for full fellowships.
🚨 Deadline April 30th
🙏 Pass the word!
International Weber Symposium
The 12th International Weber Symposium on Innovative Fluorescence Methodologies in Biochemistry and Medicine, "Weber Symposium", will be held in Genoa, Italy, on June 15-20, 2024.
www.webersymposium.com
📣Abstract submission and registration still open for the 2025 Weber Symposium!
Follow the link: www.webersymposium.com
If you are MSc/PhD/PostDoc based in Latin America, you are eligible for full fellowships.
🚨 Deadline April 30th
🙏 Pass the word!
International Weber Symposium
The 12th International Weber Symposium on Innovative Fluorescence Methodologies in Biochemistry and Medicine, "Weber Symposium", will be held in Genoa, Italy, on June 15-20, 2024.
www.webersymposium.com
Muktar is now our ambassador in Nigeria, sharing the power of HSI-Phasors for basic biomedical problems. His impact on our group has been significant, and while we'll miss him, I believe this is just the start of a strong bond between our groups 🇺🇾🔬🇳🇬
See you soon Muktar! Safe travels
Today we are saying goodbye to a fantastic visitor we host in the past 3 months Muktar Lawan from 🇳🇬 BioRTC
He has learned #HSI & #Phasors for studying neurodegeneration in African ancients cell lines
Thanks @chanzuckerberg.bsky.social @focalplane.bsky.social Mahmoud Maina for support & trust
Wonderful week full of learning and camaraderie. Thanks to all the participants, professors, and companies/funders who made #CFMO2025 a success!
Congratulations Marcela Diaz Paola Lepanto for another great course
#ImagingTheFuture
🔬🧑‍🔬🥼🧑‍💻👩‍💻 @clairebrown514.bsky.social @chanzuckerberg.bsky.social
Chau Porto 🇵🇹 it was great experience and amazing opportunity for #AdvancedBioimagingUnit @phasorpy to share what we do.
Thanks to local organizers @pm_sampaio Maria Acevedo @ALM_i3S
And A. Rossetta @FLIMLabs J. Pearson @leicamicrosystems.bsky.social for the fruitful discussion #FLIM #Phasors
Great talk by Bruno Pannunzio today at #15_OMI4Bio2025 course about #Phasor properties for #FLIM analysis
@ALM_i3S @PhasorPy @advanced_unit
Today #15_OMI4Bio2025 course at @ALM_i3S started with #FLIM and #Phasors introduction. This course is also part of the @RI_Hubs_EULAC consortium supported by EULAC group of interest.
#PhasorPy Uruguayan team @advanced_unit ready to takeoff! Final destination #Porto 🇵🇹 @ALM_i3S for “Course in optical microscopy imaging for bioscience” #FLIM #Phasors
Here we go!!!
Beautiful work Jörg! Congratulations to all the team!
New Review Alert!
"Fluorescence Phasor Analysis: Fundamental Principles and Biophysical Applications" in Biophysical Reviews!
This collaboration with Luis Gonzalez-Felcha and Alvaro Recoulat discusses the fundamentals of #phasor_analysis for #Fluorescence studies in #biophysics.
👉 rdcu.be/ecEH2
Fluorescence phasor analysis: basic principles and biophysical applications
rdcu.be