Erin Maybach
@erinmaybach.bsky.social
77 followers 80 following 15 posts
PhD candidate at Columbia University exploring the chemical and microbial world through ‘omics!
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Wrapping up a great week of science with some light LEGO dehydration synthesis! @microbialplanet.bsky.social
@fuuchan20.bsky.social
@maksaito.bsky.social
Reposted by Erin Maybach
🌊🦠#FieldworkFriday!
And that’s a wrap 🎬on C-CoMP Cruise 2 🚢! We (C-CoMP + AE) accomplished an impressive feat - 95 CTD casts, 110,778 L of sw filtered with @clio-thebgcauv.bsky.social, eddy sampling, & 9 exp types across 3 locations - to characterize marine chemical currencies & microbes!
Reposted by Erin Maybach
🌊🦠#FieldworkFriday!
It’s a carbon feast 🍽️ and microbes🦠are invited! During the March 2025 C-CoMP cruise, early career researchers incubated surface ocean microbial communities on novel carbon sources produced by phytoplankton to study carbon drawdown rate and post-uptake fate.
So well deserved! Congratulations!! :)
Reposted by Erin Maybach
The war on science in the US is already having an effect on private sector research like AlphaFold. Bears repeating but the private sector builds on top of things created by academic research for the public good. This hurts everyone.
Reposted by Erin Maybach
NIH funding supporting the HMMER and Infernal software projects has been terminated. NIH states that our work, as well as all other federally funded research at Harvard, is of no benefit to the US.
I had the opportunity to share how I apply machine learning concepts in my genomics research at the @lamont.columbia.edu 75th anniversary symposium last week! Being an ECR can be so cool!
Reposted by Erin Maybach
Warming stripes on the road to OCP @lamont.columbia.edu, with a question that is now more relevant than ever given the state of climate science in the US today.

What is next?
Reposted by Erin Maybach
NASA Is Terminating The GISS Lease In Five Weeks
nasawatch.com/personnel-ne...

"NASA’s lease of Columbia University’s Armstrong Hall in New York City, home to the Goddard Institute for Space Studies, will end effective May 31, 2025."
NASA Is Terminating The GISS Lease In Five Weeks
This was just sent to all NASA Goddard and GISS employees by Makenzie Lystrup
nasawatch.com
I imagine assembling a crummy metagenome is akin to being on Chopped…

In your basket you will find:
-Short reads from a soil sample sequenced at 0.5 Gb depth
-An incomplete reference database
-And an annotation tool that hasn’t been updated since 2010.
You have 2 CPU-core hours. Good luck.🔥
Reposted by Erin Maybach
Wonderful thread from @erinmaybach.bsky.social on the experience of a (primarily) computational scientist going on their first oceanographic research cruise. Really transporting!
As a primarily computational researcher, one of the most surprising takeaways from my first oceanographic research cruise was just how different ocean regimes feel from one another. I know this might sound obvious to many oceanographers, but for me, it was a major "aha!" moment. 🧵1/8
TLDR; science is cool :) 8/8
It’s pretty incredible — and I think having this experience will make me a better researcher, even if most of my work still happens behind a keyboard rather than behind a CTD. 7/8
But I share it because, as someone who loves the “invisible” molecular aspects of ocean science, I had never truly considered that these processes could be sensed on a human scale. 6/8
I still don’t have the words to articulate the subtle differences beyond a sense that these “invisible” features could best explain the vibe shift I felt between study sites. I won’t claim the title of "oceanographer" after my first field experience or this rather basic moment of realization. 5/8
Beyond the weather and sea surface temperature, I could feel subtle shifts that could only be attributed to the "invisible" features I'd previously thought of as abstract or purely theoretical. 4/8
Across both ends of the spectrum, these considered these processes as essentially invisible to the naked eye... Seeing the contrast between the Sargasso Sea and the Coastal New England Shelf, I was struck by how many differences, both obvious and nuanced, were tangible. 3/8
Through my graduate education so far, I’ve learned about the ocean at two extremes: the very, very large scale – concepts like Rossby numbers and geostrophic flow – and the very, very small scale – metabolites and dissolved organic matter composition. 2/8
As a primarily computational researcher, one of the most surprising takeaways from my first oceanographic research cruise was just how different ocean regimes feel from one another. I know this might sound obvious to many oceanographers, but for me, it was a major "aha!" moment. 🧵1/8
Reposted by Erin Maybach
Scientists & students from C-CoMP are headed to sea today to study ocean microbial dynamics. The research expedition on the R/V Atlantic Explorer is traveling from Bermuda to Woods Hole, MA @microbialplanet.bsky.social ccomp-stc.org
Reposted by Erin Maybach
And that's a wrap! Over the past two weeks, C-CoMP researchers braved stormy weather & rough seas to collect precious samples that will offer insights into the chemical-microbial network of the surface ocean 🌊🦠🚢!
More photos and stories to come - stay tuned!
Reposted by Erin Maybach
📣#MTTM
Graduate student Erin Maybach, a member of the Dyhrman Microbial Oceanography Group at the Lamont-Doherty Earth Observatory of Columbia University, investigates how microbial interactions regulate the flux of carbon through the surface ocean using computational and experimental approaches.
Reposted by Erin Maybach
We finish the Workshop on Genomics with a great inspirational talk! BIG DATA, by @rayanchikhi.bsky.social! Not every day one has the priviledge to interact with someone that has assembled ALL the sequencing data ever produced!!!! 🤯 #evomics2025 #genomics #bioinformatics